What are the next steps after FASTQs are generated?

You'll upload the generated data to our Prism Portal and from there we'll apply our proprietary database and bioinformatics algorithms to return a comprehensive, quantitative profile for each sample, and a biomarker report if the samples are provided in two groups of at least 3 samples each.

There is no need to adapter or quality trim the reads generated, since the analysis pipeline used by Prism Portal will include these steps.